Intragenomic reiterations detection using hidden Markov models
Identifieur interne : 008511 ( Main/Exploration ); précédent : 008510; suivant : 008512Intragenomic reiterations detection using hidden Markov models
Auteurs : Sébastien Hergalant ; Bertrand Aigle ; Bernard Decaris ; Pierre Leblond ; Jean-François MariSource :
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Abstract
We present a genomic data mining method in which the user describes a signal worked out by a second order HMM. This signal representing the probability to classify a nucleotidic residue or a group of residues in a particular state, allows the localization of repetitions in a complete bacterial genomic sequence.
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